ESPE Abstracts (2024) 98 P1-241

ESPE2024 Poster Category 1 Fat, Metabolism and Obesity 4 (9 abstracts)

Genetics of obesity: results from a tertiary paediatric weight management service

Hannah Hickingbotham 1 , Katherine Hawton 2,3 , Alanna Holt 2 , Julian Hamilton-Shield 4,2 & Dinesh Giri 2,3


1St George's Hospital NHS Trust, London, United Kingdom. 2University Hospitals Bristol and Weston NHS Foundation Trust, Bristol, United Kingdom. 3University of Bristol, Bristol, United Kingdom. 4NIHR Biomedical Research Centre (Nutrition Theme), Bristol, United Kingdom


Introduction: Monogenic obesity is characterised by early-onset, severe obesity ((body mass index) BMI >99.6th centile) and hyperphagia. Access to genetic testing is limited, thus prevalence may be underestimated. Genes in the leptin-melanocortin pathway, related to the hypothalamic control of food intake, are frequently involved. We report results obtained via the Rare Obesity Advanced DiagnosisTM genetic testing program.

Methods: 93 patients with severe obesity ((body mass index) BMI >99.6th centile for age) under the care of a tertiary paediatric weight management service were screened using a targeted obesity-related gene panel. Blood, saliva or buccal samples were taken. The 79-gene panel included genes encoding proteins in the leptin-melanocortin pathway and assessment for rearrangement of the 16p11.2 chromosomal region. Variants were classified as pathogenic or potentially relevant variants; further subdivided into suspected pathogenic, variants of unknown significance and suspected benign.

Results: 54/93 patients were female. Age ranged from 1.5-17.5 years and median age-of-onset of obesity was 3 years (range 1-11). Median BMI at testing was 32.6 kg/m2 (range 22.4-55.0) and median BMI SDS was 3.9 (range 2.1-6.0). Pathogenic variants were found in 11.8% patients (11/93), suspected pathogenic in 7.5% (7/93), variants of unknown significance in 14.0% (13/93), suspected benign in 17.2% (16/93) and one had a deletion in the 16p11.2 region. MC4R heterozygous was the most frequently identified pathogenic variant, representing 5.4% (5/93) of the samples. PCSK1 p.(Asn221Asp), a variant conferring polygenic risk for obesity, was found in 12.9% (12/93) of patients.

Pathogenic Variants (frequency) Potentially Relevant Variants (frequency) Gene with polymorphic risk variant (frequency)
Suspected Pathogenic: Variant of Unknown Significance: Suspected Benign
MC4R heterozygous (5)
RAI1 heterozygous (1)
SIM1 heterozygous (4)
Chromosomal rearrangement
16p11.2 deletion (1)
KIDINS220 (1)
KSR2 (1)
SEMA3A (2)
TUB (1)
BBS7 (1)
BBS9 (1)
VP13B 1)
CREBBP (1)
GNAS (1)
KIDINS220 (2)
KSR2 (1)
MAGEL 2 (1)
PCSK1 (2)
PLXNA3 (1)
RPS6KA3 (1)
SEMA3A (1)
DNMT3A (1)
MC4R (1)
ALMS1 (1)
EP300 (1)
HTR2C (1)
KSR2 (2)
NCOA1 (2)
NRP1 (1)
PCSK1 (2)
POMC (2)
RAI1 (2)
SIM1 (1)
PCSK1 heterozygous (12)

Conclusions: In our cohort, a pathogenic variant was identified in over 1/10 patients and suspected pathogenic variants in a further 1/20 patients. Most variants identified involved genes in the MC4R-pathway. Targeted therapies for MC4R variants, such as setmelanotide, are emerging as promising treatment options. Wider availability of testing may enable a better understanding of obesity genetics and the development of further precision, personalised therapies.

Volume 98

62nd Annual ESPE (ESPE 2024)

Liverpool, UK
16 Nov 2024 - 18 Nov 2024

European Society for Paediatric Endocrinology 

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